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Reddit mentions of Algorithms on Strings, Trees, and Sequences: Computer Science and Computational Biology

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Reddit mentions: 3

We found 3 Reddit mentions of Algorithms on Strings, Trees, and Sequences: Computer Science and Computational Biology. Here are the top ones.

Algorithms on Strings, Trees, and Sequences: Computer Science and Computational Biology
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Found 3 comments on Algorithms on Strings, Trees, and Sequences: Computer Science and Computational Biology:

u/chamcham123 · 13 pointsr/compsci

Proving algorithms is much harder than coding algorithms. I think you should get good at doing the analysis yourself. It is a very valuable skill.

There are entire books dedicated to string matching. Maybe something similar to your idea is in one of them.

Here are a couple:
https://www.amazon.com/Algorithms-Strings-Trees-Sequences-Computational/dp/0521585198/

https://www.amazon.com/Algorithms-Strings-Maxime-Crochemore/dp/1107670993/

Also, in the C code, why are you starting the clock before the “start of program” print statement (instead of after)? Printing text to the screen is a slow process and will add a lot of time to the clock.

u/CSMastermind · 1 pointr/learnprogramming

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u/[deleted] · 1 pointr/MachineLearning

try suffix trees and they can do matching k-mismatches . Other distance metrics are LCSS (longest common subsequence ) . A good place to start is the book http://www.amazon.com/Algorithms-Strings-Trees-Sequences-Computational/dp/0521585198 . Also consider typical bio-info algos like BLAST etc.. if you are working in that field